Genes Predicted to be Disrupted in Rats by Sleeping Beauty Gene-Trap Mutagenesis |
||||
Mutated Gene (click for more info) |
Gene Function |
Associated Pathologies in Mammals |
Integration |
Construct |
Putative Solute Transporter |
Shwachman–Diamond Syndrome; Cancer Metastasis |
Intron 53 of 66 |
ß-Geo Gene Trap |
|
Abcg2 |
Solute Transporter |
Cancer drug resistance, dietary photosensitization, protoporphyria |
Intron 6 of 15 |
ß-Geo Gene Trap (Conditional Potential) |
Ankrd28 |
Ankyrin repeat domain |
Unknown |
Intron 10 of 27 |
ß-Geo Gene Trap (Conditional Potential) |
Rho GTPase activating protein 26 |
Unknown |
Intron 17 of 23 |
ß-Geo Gene Trap |
|
Small GTPase Signaling; microtubule dynamics |
Unknown |
Intron 1 of 6 |
ß-Geo Gene Trap |
|
ADP-ribosylation |
Abnormal CNS repair |
Intron 1 of 9 |
ß-Geo Gene Trap (Conditional Potential) |
|
BMP receptor |
Embryonic lethal; lack of mesoderm; limb malformation; renal failure |
Intron 1 of 10 |
ß-Geo Gene Trap (Conditional Potential) |
|
F-box, E3 Ubiquitin Ligase; WD40 Domain |
Aberrant Circadian Rhythm; HIV Infection; Cancer |
Intron 1 of 14 |
ß-Geo Gene Trap |
|
Calcium channel |
Impaired glucose tolerance, body weight, motor activity, and behavior |
Intron 6 of 46 |
ß-Geo Gene Trap (Conditional Potential) |
|
Cadm1 |
Cell adhesion |
Infertility; decreased body size; impaired T cell development and response |
Intron 1 of 111 |
ß-Geo Gene Trap (Conditional Potential) |
CDK Family Kinase |
Colon Cancer Oncogene; HIV Latency |
Intron 6 of 11 |
ß-Geo Gene Trap |
|
Csnk1g1 |
Casein kinase 1, gamma 1 |
Unknown |
Intron 5 of 11 |
ß-Geo Gene Trap |
Catenin, delta 1 |
Abnormal salivary/lacrimal glands; early postnatal lethal |
Intron 1 of 17 or 18 |
ß-Geo Gene Trap |
|
Signal Transducer |
Tumor Suppressor; Anti-Viral Activity |
Intron 6 of 28 |
ß-Geo Gene Trap |
|
Polarized Exocytosis |
Anemia; Hemoglobin Deficiency |
Intron 1 of 21 |
ß-Geo Gene Trap |
|
Phenylalanyl-tRNA synthetase |
Unknown |
Intron 2 of 9 |
ß-Geo Gene Trap |
|
F-box, E3 Ubiquitin Ligase; DNA Helicase Domain |
Unknown |
Intron 19 of 22 |
ß-Geo Gene Trap |
|
TGF-beta family Signal Transduction |
Unknown |
Intron 3 of 15 |
ß-Geo Gene Trap |
|
Glutamate Receptor |
Obsessive-Compulsive; Alcoholism; Schizophrenia |
Exon 11 of 16 |
ß-Geo Gene Trap |
|
Claudin Family; Germ Cell-Specific Domain |
Unknown |
Intron 3 of 6 |
ß-Geo Gene Trap |
|
Kinesin 8 |
Infertility |
Intron 14 of 15 |
ß-Geo Gene Trap |
|
Signal Transducer |
Diabetes; Obesity |
Intron 3 of 162 |
ß-Geo Gene Trap |
|
LIM Homeobox transcription factor |
Neurological and skeletal defects; inner ear defects; deafness; belly spotting |
Intron 2 of 7 |
ß-Geo Gene Trap |
|
Meiotic recombination |
Required for meiotic DNA double strand breaks |
Intron 2 of 4 |
ß-Geo Gene Trap |
|
Mannose receptor |
Altered muscle mass, fibroblast activity, collagen metabolism |
Intron 18 of 29 |
ß-Geo Gene Trap (Conditional Potential) |
|
RNA Metabolism |
Unknown |
Intron 11 of 25 |
ß-Geo Gene Trap |
|
Papd4 |
Polyadenylation; MicroRNA stabilization |
Unknown |
Intron 7 of 14 |
ß-Geo Gene Trap |
Signaling in Pre-Synaptic Vesicles; Exocytosis |
Autism; Diabetes |
Intron 3 of 25 |
ß-Geo Gene Trap |
|
Protein tyrosine phosphatase |
Reduced lifespan; abnormal hematopoiesis; enhanced inflammation |
Intron 7 of 9 |
ß-Geo Gene Trap (Conditional Potential) |
|
Ptprh |
Protein tyrosine phosphatase |
Unknown |
Intron 1 or 2 of 14 |
ß-Geo Gene Trap (Conditional Potential) |
RNA binding |
Unknown |
Intron 6 of 7 |
ß-Geo Gene Trap |
|
C3orf19 Homolog |
Embryonic lethality |
Intron 3 of 10 or 11 |
ß-Geo Gene Trap |
|
RGD1306353 |
Zfp198-like |
Unknown |
Intron 1 of 3 |
ß-Geo Gene Trap |
RGD1559958 |
Fam73a-like |
Unknown |
Intron 13 of 21 or 1 of 12 |
ß-Geo Gene Trap |
Cell Cycle |
Unknown |
Intron 7 of 7 |
ß-Geo Gene Trap |
|
High Affinity Glutamate Transporter |
Episodic Ataxia; Hemiplegia; Seizures |
Intron 2 of 9 |
ß-Geo Gene Trap |
|
Golgi Sugar Transporter |
Vertebrate Fusion |
Intron 1 of 7 |
ß-Geo Gene Trap |
|
RNA binding, splicing |
Unknown |
Intron 4 of 5 |
ß-Geo Gene Trap (Conditional Potential) |
|
Golgi Transmembrane Protein |
Unknown |
Intron 2 of 8 |
ß-Geo Gene Trap |
|
DNA Metabolism |
Prostate Tumor Suppressor/Marker |
Intron 3 of 16 |
ß-Geo Gene Trap |
|
Signal Transducer; 2 PTB domains; GAP domain |
Diabetes; Leanness; Obesity |
Intron 1 of 26 |
ß-Geo Gene Trap |
|
Transcriptional enhancer |
Abnormal heart development, embryonic lethal |
Intron 1 of 10-12 |
ß-Geo Gene Trap |
|
Transmembrane Lycopene Cyclase |
Coronary Heart Disease; Elevated Cholesterol |
Intron 6 of 10 |
ß-Geo Gene Trap |
|
Cellular Redox Homeostasis |
Unknown |
Intron 5 of 7 |
ß-Geo Gene Trap |
|
Ubiquitin-Conjugating Enzyme; E2 Ligase |
Huntington Disease; Alzheimer’s disease |
Intron 1 of 6 |
ß-Geo Gene Trap |
|
Ubiquitin-Conjugating Enzyme; E2 Ligase |
Unknown |
Intron 1 of 14 |
ß-Geo Gene Trap |
|
Zinc finger protein |
Unknown |
Intron 13 |
ß-Geo Gene Trap (Conditional Potential) |
|
Transcription Factor; Zinc finger Domain |
T-Cell Lymphoma-Associated Antigen |
Intron 4 of 24 |
ß-Geo Gene Trap |
|
(1) Intron 1 of 11 according to Entrezgene; before exon 1 of 12 according to Ensemble
(2) Currently not confirmed as Ksr2 due to high homology with other genes
(3) Listed as pseudogene with transcription discrepancies
